And the irrational worries of parents-to-be often lead to being more cautious than necessary.
I know and that's a good thing.
Pregnant women on flights has gone on without consequence for decades.
Says who ? The problem is that there is a certain rate of congenital malformations, growth disturbances etc
It is not that easy to determine the reasons. Maybe flights increase that risk. They probably do. The question is, if they do so significantly. A raise from 5% to 5.0001 % hardly matters in reality, so it would rather be an academic aspect.
Full-body security x-ray scanners have been in common use for less than a year.
While my wife was pregnant artificial sweeteners using the stevia plant began to gain grocery shelf space. When we asked around about their safety for her and the baby we were told by multiple doctors and pharmacists, "There is nothing in it that should cause problems, but the testing on pregnant women is not completed yet." We didn't use it.
Now I agree with the second part. But you can hardly compare a specific food product, like artificial sweeteners ( or trans fat acids

) with this case.
Because food or drugs interact in very complex way with your body. It's hard to predict the influence of new and unknown products on a human body.
That's why it is rather healthy to avoid suspicious food ( especially if you are pregnant ) and stick to well known products instead.
But in this case we are talking about radiation. The method is new, but the effects of radiation is related to the dose and time of exposure. From what I understand this technology uses non ionising radiation with less than 5,0000*10-5 mSv. As the company says : 1000 times less than a standard chest x-ray.
Intercontinental flights however will expose you to a radiation dose 0,01 mSv ( London - LA according to a link I just searched ).
Now that comes pretty close to a chest x-ray ( 0,02 - 0,08 mSv ).
According to this
http://www.bt.cdc.gov/radiation/prenatal.asp link that amount of radiation shouldn't be a problem.
Statistically speaking it probably isn't, but I understand that parents worry anyway ( especially if you thik about the onehit hypothesis - theoretically one small exposure can cause huge damage ).
But no matter how you look at it - the airport scanner is irrelevant when talking about radiation.
It may be a psychological threat - new and unkown technology - but apart from that I don't see a problem. Especially since the unborn child is protected by the body of the mother. From what I understand - after having read a few articles about those scanners - their effects are superficial. I don't see how these terahertz frequencies could effectivly penetrate deeper areas of the body and do harm in any way.
FoolKiller has summed it up perfectly. Parents to be, even second time round, are perhaps overly cautious but only because they want to protect their child.
I am concerned about the effects of the scan so want to learn more about it and then make a rational decision about taking the flight. It would be irrational to just cancel the flight because of a fear of the unknown so I'm looking into as many sources as possible to find out more about it. It is a new a new unproven procedure so it may not be easy getting a definitive answer but hopefully I'll be able to find out enough to make reasoned decision.
I see. I pretty much said all I wanted to say in the answer to Foolkiller, so you might want to read that.
The scanner is not your problem.
If at all - it is the flight itself.
( Btw, since you can't know that - I'm pretty much at the end of med school, so I'm not just quoting some articles on the internet ).
I'm by no means an expert for radiation or pregnancy risks, but I don't see how that scanner could do any harm to an unborn child.